Yeah, uploading a version without the statistics compiled in is fine. Be sure to include a note of that change to the source to fix those issues.
Also, I was referencing a the internal Main.cpp by mistake. I run a tool over the source and project files to perform any changes to the source needed for public releases (making some source files have more or less code). This helps with removing code which hasn't been fully tested and\or implemented.
Obviously statistics wasn't meant for AI, so a check needs to be put into place to tell if the killer or killee unit has a player index and if not, ignore the statistics record event, thus once again enabling statistics. That or have a special branch which details AI related killings.